- 16 Mar, 2017 2 commits
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Chris Cantwell authored
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Chris Cantwell authored
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- 10 Mar, 2017 1 commit
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Michael Turner authored
Adjusted BL thickness in corners. Only applies to 2D mesher. See merge request !739
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- 08 Mar, 2017 4 commits
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Julian Marcon authored
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Julian Marcon authored
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Julian Marcon authored
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Chris Cantwell authored
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- 07 Mar, 2017 1 commit
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Julian Marcon authored
Conflicts: CHANGELOG.md
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- 06 Mar, 2017 2 commits
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Chris Cantwell authored
Fix documentation issues. This MR just fixes a few minor errors in the doxygen docs and adds an extra pdflatex run to the user guide to ensure references are properly included. See merge request !749
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Chris Cantwell authored
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- 04 Mar, 2017 1 commit
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Chris Cantwell authored
Switch to MPI_lang_... variables This MR switches the CMake configuration to use `MPI_<lang>_...` variables instead of the existing `MPI_...` variables. Currently Nektar++ uses `MPI_LIBRARY` and `MPI_EXTRA_LIBRARY`, which have been deprecated for some time. In recent versions of CMake, at least on OS X, `MPI_EXTRA_LIBRARY` is no longer set, meaning that Nektar++ fails to configure if MPI is enabled. A similar fix has also been applied to gsmpi which has the same issue. See merge request !725
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- 03 Mar, 2017 5 commits
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Chris Cantwell authored
Fix: Dont read the same files again for every variable This branch adds a check to prevent EquationSystem from reading the same fld/pts files again for each variable. This gives a huge speedup in some cases. I also split the EquationSystem::EvaluateFunction method into three new methods: one for expressions, one for fld files and one for pts files to make the code more readable. However, i think its still a mess with lots of duplicate code and even more things that would make much more sense in some other class. Even worse is that the Forcing base class holds a complete copy of this code. I would like to move the whole Function logic from Forcing and EquationSystem into a new class that lives in SolverUtils in the future. Should we discuss that here or do you want me to write to the mailing list? See merge request !670
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Dave Moxey authored
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Dave Moxey authored
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Dave Moxey authored
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Dave Moxey authored
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- 02 Mar, 2017 6 commits
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Dave Moxey authored
fix/3d-boundary-layers Recent merge of feature/mesh_spacing broke a number of parts of the mesh generation, mostly do with orientation. The CAD orientation routines have now been rewritten in this branch and the relevant code updated. 3 more regression tests, which didnt work prior to this fix, have been added A small amount of wall time optimisation has been done to the OCC cad interface and the reduction of some L0 asserts to L1. See merge request !744
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Kilian Lackhove authored
removed redundant m_loadedFields conditional. The case that we try to load a non-transient file again is now handled by the m_loadedFldFields and m_loadedPtsFields logic.
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Kilian Lackhove authored
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Chris Cantwell authored
tidy/warnings This gets rid of all the compile warnings for the buildbot "full" equivalent on ubuntu 16.04, mac and the compute nodes. See merge request !743
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mike turner authored
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Chris Cantwell authored
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- 01 Mar, 2017 2 commits
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Michael Turner authored
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Kilian Lackhove authored
Fix/PetSc_mkl this fixes blas/lapack detection of the PetSc configuration for systems which have no native blas/lapack installed When native blas/lapack is enabled, we use this for PetSc (just like before, now we just do it explicitly and not by accident) , when MKL is enabled we use MKL and for all other cases, PetSc will download its own blas/lapack and compile it itself. This might be extended to ACML and other blas/lapack providers in the future but i can only test native and MKL on my systems. See merge request !740
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- 28 Feb, 2017 7 commits
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Kilian Lackhove authored
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Kilian Lackhove authored
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Michael Turner authored
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Michael Turner authored
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Chris Cantwell authored
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Dave Moxey authored
feature/thirdpartylibs Add thirdparty installs to fortran compiled libraries. Done: blas/lapack See merge request !732
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Chris Cantwell authored
Fix/fc interpolator Provide a fix for the interpolator in FieldUtils which currently using the wrong offset to place interpolated points back into the new field. This is mainly a problem when quad elements are listed before tri elements since this automatically leads to the incorrect offset. This would have not been a problem if tris went before quads. This MR also therefore adds in a regression test for this case. See merge request !746
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- 27 Feb, 2017 7 commits
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Spencer Sherwin authored
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Spencer Sherwin authored
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Michael Turner authored
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Michael Turner authored
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Chris Cantwell authored
Cell model translator for cardiac solver. This adds a python utility for generating cell model code from CellML models. See merge request !723
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Chris Cantwell authored
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Michael Turner authored
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- 26 Feb, 2017 2 commits
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Spencer Sherwin authored
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mike turner authored
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