Commit 9a471326 authored by Chris Cantwell's avatar Chris Cantwell

New Tentusscher class encompassing all variants.

parent de6bf027
......@@ -18,6 +18,7 @@ IF( NEKTAR_SOLVER_CARDIAC_EP )
./CellModels/TenTusscher06Epi.cpp
./CellModels/TenTusscher06M.cpp
./CellModels/TenTusscher06Endo.cpp
./CellModels/TenTusscher06.cpp
./Filters/FilterCheckpointCellModel.cpp
./Filters/FilterElectrogram.cpp
./Stimuli/Stimulus.cpp
......
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///////////////////////////////////////////////////////////////////////////////
//
// File TenTusscher06Epi.h
//
// For more information, please see: http://www.nektar.info
//
// The MIT License
//
// Copyright (c) 2006 Division of Applied Mathematics, Brown University (USA),
// Department of Aeronautics, Imperial College London (UK), and Scientific
// Computing and Imaging Institute, University of Utah (USA).
//
// License for the specific language governing rights and limitations under
// Permission is hereby granted, free of charge, to any person obtaining a
// copy of this software and associated documentation files (the "Software"),
// to deal in the Software without restriction, including without limitation
// the rights to use, copy, modify, merge, publish, distribute, sublicense,
// and/or sell copies of the Software, and to permit persons to whom the
// Software is furnished to do so, subject to the following conditions:
//
// The above copyright notice and this permission notice shall be included
// in all copies or substantial portions of the Software.
//
// THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS
// OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
// FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL
// THE AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
// LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING
// FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER
// DEALINGS IN THE SOFTWARE.
//
// Description: ten Tusscher 2006 Epicardium cell model
//
///////////////////////////////////////////////////////////////////////////////
#ifndef NEKTAR_SOLVERS_ADRSOLVER_EQUATIONSYSTEMS_TENTUSSCHER_PANFILOV_2006_CELL_H
#define NEKTAR_SOLVERS_ADRSOLVER_EQUATIONSYSTEMS_TENTUSSCHER_PANFILOV_2006_CELL_H
#include <CardiacEPSolver/CellModels/CellModel.h>
namespace Nektar
{
class TenTusscher06 : public CellModel
{
public:
/// Creates an instance of this class
static CellModelSharedPtr create(
const LibUtilities::SessionReaderSharedPtr& pSession,
const MultiRegions::ExpListSharedPtr& pField)
{
return MemoryManager<TenTusscher06>::AllocateSharedPtr(pSession, pField);
}
/// Name of class
static std::string className;
/// Constructor
TenTusscher06(const LibUtilities::SessionReaderSharedPtr& pSession, const MultiRegions::ExpListSharedPtr& pField);
/// Desctructor
virtual ~TenTusscher06() {}
protected:
virtual void v_Update(
const Array<OneD, const Array<OneD, NekDouble> >&inarray,
Array<OneD, Array<OneD, NekDouble> >&outarray,
const NekDouble time);
/// Prints a summary of the model parameters.
virtual void v_GenerateSummary(SummaryList& s);
virtual void v_SetInitialConditions();
NekDouble g_to;
NekDouble g_Ks;
NekDouble s_inf_factor;
NekDouble s_tau_factor;
NekDouble k_0;
enum Variants {
eEpicardium,
eEndocardium,
eMid,
eIschemia
};
enum Variants model_variant;
static std::string lookupIds[];
static std::string def;
};
}
#endif
......@@ -14,9 +14,14 @@ SET(PP_SOURCES ./Prepacing.cpp
../../CellModels/CellModel.cpp
../../CellModels/CourtemancheRamirezNattel98.cpp
../../CellModels/FentonKarma.cpp
../../CellModels/TenTusscher06Endo.cpp
../../CellModels/TenTusscher06Epi.cpp
../../CellModels/TenTusscher06M.cpp
../../CellModels/TenTusscher06.cpp
../../Stimuli/Stimulus.cpp
../../Stimuli/StimulusPoint.cpp
../../Stimuli/Protocol.cpp
../../Stimuli/ProtocolS1.cpp
../../Stimuli/ProtocolS1S2.cpp)
ADD_SOLVER_EXECUTABLE(PrePacing solvers-extra ${PP_SOURCES})
TARGET_LINK_LIBRARIES(PrePacing ${LinkLibraries})
......
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