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Turn off class graph generation when dot not found

Jeremy Cohen requested to merge jhc02/nektar:fix/issue242 into master

This MR addresses issue #242 (closed), setting a variable in cmake/Doxygen.cmake that determines whether the dot command is found or not. The variable is set to YES or NO and the value is then added into the Doxyfile generated from Doxyfile.in, setting the HAVE_DOT and CLASS_GRAPH parameters within that file to YES or NO.

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