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Commit 4e29ce2c authored by Peter Vos's avatar Peter Vos
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Added metis compile instructions 

git-svn-id: https://gforge.sci.utah.edu/svn/nektar/trunk@2025 305cdda6-5ce1-45b3-a98d-dfc68c8b3305
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docs/html/compile_linux.html
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...@@ -140,7 +140,7 @@ ...@@ -140,7 +140,7 @@
</p> </p>
<p style="font-size:9px;"> <p style="font-size:9px;">
Last Revision:<br/>$Date: 2009/06/29 09:24:47 $ Last Revision:<br/>$Date: 2009/07/03 02:53:06 $
</p> </p>
</div> </div>
<div id="mainContent"> <div id="mainContent">
...@@ -300,7 +300,7 @@ ...@@ -300,7 +300,7 @@
</li> </li>
<li> <li>
The last step is to extract and compile the sparse matrix library developed by <em>NIST</em>. (For more information about this library, see <a href="http://math.nist.gov/spblas/original.html" target="_blank">http://math.nist.gov/spblas/original.html</a>) The following step is to extract and compile the sparse matrix library developed by <em>NIST</em>. (For more information about this library, see <a href="http://math.nist.gov/spblas/original.html" target="_blank">http://math.nist.gov/spblas/original.html</a>)
<ol> <ol>
<li> <li>
In <em>ThirdParty/</em>, extract the spblastk0.9b.tar.bz2 archive with &quot;tar -xjvf spblastk0.9b.tar.bz2&quot; (without the quotes). This will create the directory <em>spblastk0.9b/</em>. In <em>ThirdParty/</em>, extract the spblastk0.9b.tar.bz2 archive with &quot;tar -xjvf spblastk0.9b.tar.bz2&quot; (without the quotes). This will create the directory <em>spblastk0.9b/</em>.
...@@ -318,6 +318,31 @@ ...@@ -318,6 +318,31 @@
</li> </li>
</ol> </ol>
</li> </li>
<li>
The last step is to extract and compile the graph partitioning package <em>METIS</em>. As we use a modified version of the
standard METIS distribution, you are required to link against this version rather than the standard version possibly
available on your system. (For more information about the original METIS library, see <a href="http://www.cs.umn.edu/~karypis/metis"
target="_blank">http://www.cs.umn.edu/~karypis/metis</a>,
for more information about the modified version, click <a href="./metisandnektar++.txt"
target="_blank">here</a>)
<ol>
<li>
In <em>ThirdParty/</em>, extract the modmetis-4.0.tar.bz2 archive with &quot;tar -xjvf modmetis-4.0.tar.bz2&quot; (without the quotes). This will create the directory <em>modmetis-4.0/</em>.
</li>
<li>
Change to the directory <em>modmetis-4.0/build/</em>
</li>
<li>
Compile the library using the previously installed <em>CMake</em>
</li>
<ol>
<li>Generate the makefiles using the command &quot;../../CMake/bin/cmake ../&quot; (or "../../cmake_cvs/CMake/bin/cmake ../" for 64 bit Linux) (no quotes).</li>
<li>Build the library by typing &quot;make install&quot; </li>
</ol>
</li>
</ol> </ol>
<h3> <h3>
<a name="Setting_up_BLAS"></a> Setting up BLAS <a name="Setting_up_BLAS"></a> Setting up BLAS
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docs/html/compile_osx.html
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...@@ -124,7 +124,7 @@ ...@@ -124,7 +124,7 @@
<p style="font-size: 9px;">Last Revision:<br> <p style="font-size: 9px;">Last Revision:<br>
$Date: 2009/06/29 03:34:17 $</p> $Date: 2009/06/29 09:24:47 $</p>
</div> </div>
...@@ -276,39 +276,75 @@ wish</li> ...@@ -276,39 +276,75 @@ wish</li>
</li> </li>
<li>The last step is to extract and compile the sparse matrix library developed by <em>NIST</em>. (For more information about this library, see <a href="http://math.nist.gov/spblas/original.html" target="_blank">http://math.nist.gov/spblas/original.html</a>) <li>The following step is to extract and compile the sparse matrix library developed by <em>NIST</em>. (For more information about this library, see <a href="http://math.nist.gov/spblas/original.html" target="_blank">http://math.nist.gov/spblas/original.html</a>)
<ol> <ol>
<li>In <em>ThirdParty/</em>, extract the <li>In <em>ThirdParty/</em>, extract the
spblastk0.9b.tar.bz2 archive with "tar -xjvf spblastk0.9b.tar.bz2" spblastk0.9b.tar.bz2 archive with "tar -xjvf spblastk0.9b.tar.bz2"
(without the quotes). This will create the directory <em>spblastk0.9b/</em>.</li> (without the quotes). This will create the directory <em>spblastk0.9b/</em>.</li>
<li>Change to the directory <em>spblastk0.9b/build/</em></li> <li>Change to the directory <em>spblastk0.9b/build/</em></li>
<li>Compile the library using the previously installed <em>CMake</em></li> <li>Compile the library using the previously installed <em>CMake</em></li>
<ol> <ol>
<li>Generate the makefiles using the command "../../CMake/bin/cmake ../"</li> <li>Generate the makefiles using the command "../../CMake/bin/cmake ../"</li>
<li>Build and install the library by typing "make install" </li> <li>Build and install the library by typing "make install" </li>
</ol> </ol>
</ol>
</li>
<li>
The last step is to extract and compile the graph partitioning package <em>METIS</em>. As we use a modified version of the
standard METIS distribution, you are required to link against this version rather than the standard version possibly
available on your system. (For more information about the original METIS library, see <a href="http://www.cs.umn.edu/~karypis/metis"
target="_blank">http://www.cs.umn.edu/~karypis/metis</a>,
for more information about the modified version, click <a href="./metisandnektar++.txt"
target="_blank">here</a>)
<ol>
<li>
In <em>ThirdParty/</em>, extract the modmetis-4.0.tar.bz2 archive with &quot;tar -xjvf modmetis-4.0.tar.bz2&quot; (without the quotes). This will create the directory <em>modmetis-4.0/</em>.
</li>
<li>
Change to the directory <em>modmetis-4.0/build/</em>
</li>
<li>Compile the library using the previously installed <em>CMake</em></li>
<ol>
<li>Generate the makefiles using the command "../../CMake/bin/cmake ../"</li>
<li>Build and install the library by typing "make install" </li>
</ol>
</ol>
</li>
</ol> </ol>
</li>
<h3><a name="Generating_the_GCC_Makefiles_with_CMake"></a>Generating the GCC Makefiles with CMake</h3>
</ol>
<h3><a name="Generating_the_GCC_Makefiles_with_CMake"></a>Generating the GCC Makefiles with CMake</h3>
<p>Now that all of the required libraries are setup in the correct <p>Now that all of the required libraries are setup in the correct
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docs/html/compile_windows.html
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...@@ -111,7 +111,7 @@ ...@@ -111,7 +111,7 @@
<p><a href="acknowledgments.html" id="menu_Acknowledgments">Acknowledgments</a></p> <p><a href="acknowledgments.html" id="menu_Acknowledgments">Acknowledgments</a></p>
<p><a href="mailto:nektar-inquiry@sci.utah.edu" id="menu_Contact">Contact</a></p> <p><a href="mailto:nektar-inquiry@sci.utah.edu" id="menu_Contact">Contact</a></p>
<p style="font-size:9px;">Last Revision:<br/>$Date: 2009/05/12 16:18:58 $</p> <p style="font-size:9px;">Last Revision:<br/>$Date: 2009/06/29 09:24:47 $</p>
</div> </div>
<div id="mainContent"> <div id="mainContent">
<!-- InstanceBeginEditable name="Title" --> <!-- InstanceBeginEditable name="Title" -->
...@@ -198,7 +198,7 @@ ...@@ -198,7 +198,7 @@
</li> </li>
</ol> </ol>
</li> </li>
<li> The last step is to extract and compile the sparse matrix library developed by <em>NIST</em>.(For more information about this library, see <a href="http://math.nist.gov/spblas/original.html" target="_blank">http://math.nist.gov/spblas/original.html</a>) <li> The following step is to extract and compile the sparse matrix library developed by <em>NIST</em>.(For more information about this library, see <a href="http://math.nist.gov/spblas/original.html" target="_blank">http://math.nist.gov/spblas/original.html</a>)
<ol> <ol>
<li>In <em>ThirdParty\,</em> extract the spblastk0.9.tar.bz2 archive. This will create the directory <em>spblastk0.9\</em>. <li>In <em>ThirdParty\,</em> extract the spblastk0.9.tar.bz2 archive. This will create the directory <em>spblastk0.9\</em>.
<li> Launch the previously installed <em>CMake</em> by typing "CMakeSetup.exe" at the VS command prompt (without the quotes) or by just double clicking on the <em>CMake</em> icon that appears on your desktop after installation. <li> Launch the previously installed <em>CMake</em> by typing "CMakeSetup.exe" at the VS command prompt (without the quotes) or by just double clicking on the <em>CMake</em> icon that appears on your desktop after installation.
...@@ -206,18 +206,47 @@ ...@@ -206,18 +206,47 @@
<li>If launching from the VS command prompt and it can't find the file give it the full path. If you installed it in the default path, try entering &quot;C:\Program Files\CMake 2.6\bin\CMakeSetup.exe&quot; (this time with the quotes).</li> <li>If launching from the VS command prompt and it can't find the file give it the full path. If you installed it in the default path, try entering &quot;C:\Program Files\CMake 2.6\bin\CMakeSetup.exe&quot; (this time with the quotes).</li>
</ul> </ul>
</li> </li>
<li>Fill in the "Where is the source code:" field at the top of the CMake. This is the path to the <em>ThirdParty\spblastk0.9\</em> directory. For example, <em>C:\Nektar++\ThirdParty\spblastk0.9</em> <li>Fill in the "Where is the source code:" field at the top of the CMake. This is the path to the <em>ThirdParty\spblastk0.9\</em> directory. For example, <em>C:\Nektar++\ThirdParty\spblastk0.9</em>
</li> </li>
<li>Fill in the "Where to build the binaries:" field at the top of CMake. This is the path to the <em>ThirdParty\spblastk0.9\build\</em> directory. For example, <em>C:\Nektar++\ThirdParty\spblastk0.9\build</em>. The Visual Studio solution files will be placed here. <li>Fill in the "Where to build the binaries:" field at the top of CMake. This is the path to the <em>ThirdParty\spblastk0.9\build\</em> directory. For example, <em>C:\Nektar++\ThirdParty\spblastk0.9\build</em>. The Visual Studio solution files will be placed here.
</li>
<li>
Click the &quot;Configure&quot; button at the bottom of the program. It will ask for the platform to generate the files for. Select <em>Visual Studio 9 2008</em>. Press <em>OK</em>.
</li>
<li>Press the &quot;Configure&quot; button again. This time everything should be GRAY, meaning everything is set. Press the &quot;OK&quot; button, and the Visual Studio solution will be created. </li>
</li>
<li>Open the solution file with Visual Studio.From the &quot;Build&quot; menu, select &quot;Configuration Manager...&quot;. For full optimizations, select &quot;Release&quot; from the &quot;Active solution configuration:&quot; menu.</li>
<li>
Select the "INSTALL" project from the "Solution Explorer" on the left. From the "Build" menu, select "build INSTALL". This will build and install the library.
</li>
</ol>
</li>
<li>
The last step is to extract and compile the graph partitioning package <em>METIS</em>. As we use a modified version of the
standard METIS distribution, you are required to link against this version rather than the standard version possibly
available on your system. (For more information about the original METIS library, see <a href="http://www.cs.umn.edu/~karypis/metis"
target="_blank">http://www.cs.umn.edu/~karypis/metis</a>,
for more information about the modified version, click <a href="./metisandnektar++.txt"
target="_blank">here</a>)
<ol>
<li>In <em>ThirdParty\,</em> extract the modmetis-4.0.tar.bz2 archive. This will create the directory <em>modmetis-4.0\</em>.
<li> Launch the previously installed <em>CMake</em> by typing "CMakeSetup.exe" at the VS command prompt (without the quotes) or by just double clicking on the <em>CMake</em> icon that appears on your desktop after installation.
<ul>
<li>If launching from the VS command prompt and it can't find the file give it the full path. If you installed it in the default path, try entering &quot;C:\Program Files\CMake 2.6\bin\CMakeSetup.exe&quot; (this time with the quotes).</li>
</ul>
</li>
<li>Fill in the "Where is the source code:" field at the top of the CMake. This is the path to the <em>ThirdParty\modmetis-4.0\</em> directory. For example, <em>C:\Nektar++\ThirdParty\modmetis-4.0</em>
</li>
<li>Fill in the "Where to build the binaries:" field at the top of CMake. This is the path to the <em>ThirdParty\modmetis-4.0\build\</em> directory. For example, <em>C:\Nektar++\ThirdParty\modmetis-4.0\build</em>. The Visual Studio solution files will be placed here.
</li>
<li>
Click the &quot;Configure&quot; button at the bottom of the program. It will ask for the platform to generate the files for. Select <em>Visual Studio 9 2008</em>. Press <em>OK</em>.
</li>
<li>Press the &quot;Configure&quot; button again. This time everything should be GRAY, meaning everything is set. Press the &quot;OK&quot; button, and the Visual Studio solution will be created. </li>
</li> </li>
<li>
Click the &quot;Configure&quot; button at the bottom of the program. It will ask for the platform to generate the files for. Select <em>Visual Studio 9 2008</em>. Press <em>OK</em>.
</li>
<li>Press the &quot;Configure&quot; button again. This time everything should be GRAY, meaning everything is set. Press the &quot;OK&quot; button, and the Visual Studio solution will be created. </li>
</li>
<li>Open the solution file with Visual Studio.From the &quot;Build&quot; menu, select &quot;Configuration Manager...&quot;. For full optimizations, select &quot;Release&quot; from the &quot;Active solution configuration:&quot; menu.</li> <li>Open the solution file with Visual Studio.From the &quot;Build&quot; menu, select &quot;Configuration Manager...&quot;. For full optimizations, select &quot;Release&quot; from the &quot;Active solution configuration:&quot; menu.</li>
<li> <li>
Select the "INSTALL" project from the "Solution Explorer" on the left. From the "Build" menu, select "build INSTALL". This will build and install the library. Select the "INSTALL" project from the "Solution Explorer" on the left. From the "Build" menu, select "build INSTALL". This will build and install the library.
</li> </li>
</ol> </ol>
</li> </li>
......
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